Peer-reviewed conference proceedings
56 peer-reviewed conference papers and proceedings from international computer science, bioinformatics, computational chemistry and parallel-computing venues.
2018 (3 entries)
2017 (8 entries)
2016 (11 entries)
Multiobjective based scoring function for ligand based virtual screening
GrantFinder, a web based tool for the search of research grant calls
A hybrid machine learning and molecular modeling methodology for the prediction of novel blood anticolagulants
ZincFetcher: a tool for easy compound filtering from ZINC database
Fuzzy vs Kmeans clustering in QSAR data partition. A comparative study
Non-steroidal anti-inflammatory drugs as inhibitors of cyclooxygenases: what we have learned and what is next
Molecular modeling studies of thieno[3,2-c]pyran analogues as inhibitor against the anti-inflammatory target COX-2
Multiobjective based scoring function for ligand based Virtual Screening
2015 (8 entries)
A GPU solution of the HP Protein Folding Problem based on UEGO
Molecular Dynamics Simulations of Ligand Recognition upon Binding Antithrombin: A MM/GBSA Approach
Improving activity prediction of Adenosine A2B receptor antagonists by machine learning methods
Support Vector Machines Prediction of drug solubility on GPUs
Molecular docking and Biological evaluation of functionalized benzo[h]quinolines as Colon cancer agents
Applications of High Performance Computing in Bioinformatics, Computational Biology and Computational Chemistry
Enhancing the parallelization of Non-Bonded Interactions Kernel for Virtual Screening on GPUs
2014 (8 entries)
Parallel Computation of Non-Bonded Interactions in Drug Discovery: Nvidia GPUs vs. Intel Xeon Phi
Application of parallel blind docking with BINDSURF for the study of platinum derived compounds as anticancer drugs
An Efficient Solvent Accessible Surface Area calculation applied in Ab Initio Protein Structure Prediction
An improved Fuzzy Clustering methodology applied to the study of Protein Conformational Ensembles
The role of High Performance Computing in Bioinformatics
Solving the HP Protein Folding Problem by an Evolutionary Algorithm
2013 (6 entries)
Impact of implicit solvation models on database enrichment in GPU based blind Virtual Screening
A GPU based Conformational Entropy Calculation Method
Improvement of Virtual Screening predictions using Support Vector Machines
A GPU based Volunteer Computing Platform for the discovery of bioactive compounds
Application of Ant Colony Optimization in an hybrid coarse-grained and all-atom based Protein Structure prediction strategy
2012 (3 entries)
Analytical solvent accessible surface area calculation on GPUs
Parallel blind Virtual Screening with implicit solvation models
2011 (6 entries)
A Pipeline Pilot based SOAP implementation of FlexScreen for High-Throughput Virtual Screening
BINDSURF: a fast blind Virtual Screening methodology on GPUs
MURCIA: Fast parallel solvent accessible surface area calculation on GPUs and application to drug discovery and molecular visualization
2009 (1 entries)
Implementation of an effective non-bonded interactions kernel for biomolecular simulations on the Cell processor
2008 (1 entries)
High Throughput in-silico Screening against flexible protein receptors
2007 (1 entries)
Receptor specific forcefield: improving classical forcefields with quantum mechanical calculations